BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035E06SP1|AL430065
(953 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1779 1851 0.0
>3x_Contig1779
Length = 24855
Score = 1851 bits (933), Expect = 0.0
Identities = 951/955 (99%), Gaps = 2/955 (0%)
Strand = Plus / Plus
Query: 1 gatcttcaagaatttcagccgttccaatcggctctaccatctcagcaacaacagcaacag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3919 gatcttcaagaatttcagccgttccaatcggctctaccatctcagcaacaacagcaacag 3978
Query: 61 cagtatctcagtccacgaccatcgattaatgcttttcagcctccaaatcaaggccagttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3979 cagtatctcagtccacgaccatcgattaatgcttttcagcctccaaatcaaggccagttt 4038
Query: 121 ttgcagtccaatgcaggtggattggttacatcacctcaacctcaactctcatcccattcc 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4039 ttgcagcccaatgcaggtggattggttacatcacctcaacctcaactctcatcccattcc 4098
Query: 181 aatctatcatctgacggatatttcagctcactcataaccccttcaccaccaatgatgccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4099 aatctatcatctgacggatatttcagctcactcataaccccttcaccaccaatgatgccc 4158
Query: 241 acatcgtctcctcaacctcagaacatatcgaacggcgtgaatttatccgcagcataccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4159 acatcgtctcctcaacctcagaacatatcgaacggcgtgaatttatccgcagcataccag 4218
Query: 301 cagcatattccagagtgtggctctaacctcaattatcaagtgcgaccaaatgctgtcagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4219 cagcatattccagagtgtggctctaacctcaattatcaagtgcgaccaaatgctgtcagt 4278
Query: 361 ccacgaccagcacgttcccagtcagacaacattttagatgatttaaaggcattgcagcag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4279 ccacgaccagcacgttcccagtcagacaacattttagatgatttaaaggcattgcagcag 4338
Query: 421 caagtggatcaattgaatcaaacatactcatacgatgggagacgttaaaatgtaaccaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4339 caagtggatcaattgaatcaaacatactcatacgatgggagacgttaaaatgtaaccaaa 4398
Query: 481 cttccacatagcgcaagagtcgaaaatatatacaaaacgatatagaaatactcgcaacac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4399 cttccacatagcgcaagagtcgaaaatatatacaaaacgatatagaaatactcgcaacac 4458
Query: 541 atacttaaagacaaccctagtcttcatattcacctgttccagatggcaagtggggaagaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4459 atacttaaagacaaccctagtcttcatattcacctgttccagatggcaagtggggaagaa 4518
Query: 601 atagaggtaacgctgcatataagtattgtagatcaataatgcatggtaagtcccaacgta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4519 atagaggtaacgctgcatataagtattgtagatcaataatgcatggtaagtcccaacgta 4578
Query: 661 catcttaatcacgtgaccaattgaaagatcactgctgcgaaaggaatcccagggctcttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4579 catcttaatcacgtgaccaattgaaagatcactgctgcgaaaggaatcccagggctcttt 4638
Query: 721 ttgaccagtactggggacgaatcacctcaattcacatttcactacgttaataagatagga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4639 ttgaccagtactggggacgaatcacctcaattcacatttcactacgttaataagatagga 4698
Query: 781 cactgcattaaattacattaacattcaaaagtggctattatatacaaaccaaagtgtcta 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4699 cactgcattaaattacattaacattcaaaagtggctattatatacaaaccaaagtgtcta 4758
Query: 841 tttcatcgctaaacttcccaaattactcttttgtaataaggaatcttaggcgcataatgg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4759 tttcatcgctaaacttcccaaattactcttttgtaataaggaatcttaggcgcataatgg 4818
Query: 901 gatt-cgcaatgttccggtccaggtatccagatagctttt-aaaamtttgatttc 953
|||| ||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 4819 gattccgcaatgttccggtccaggtatccagatagcttttaaaaactttgatttc 4873
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6421
Number of Sequences: 1807
Number of extensions: 6421
Number of successful extensions: 128
Number of sequences better than 1.0e-20: 1
length of query: 953
length of database: 10,358,551
effective HSP length: 16
effective length of query: 937
effective length of database: 10,329,639
effective search space: 9678871743
effective search space used: 9678871743
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)